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Tag: Reproducibility

4 posts tagged with Reproducibility

April 3, 2023
FAIRopen-sciencedata-managementbioinformaticsreproducibilitymetadata

FAIR Data Principles in Practice: A Bioinformatics Engineer's Guide

How to actually implement FAIR (Findable, Accessible, Interoperable, Reusable) data principles in bioinformatics projects — with concrete tools, metadata standards, and code.

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November 8, 2022
snakemakebioinformaticsworkflowsreproducibility

Getting Started with Snakemake for Bioinformatics Workflows

A practical introduction to Snakemake — why it matters for reproducible bioinformatics and how to structure your first workflow.

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September 5, 2022
nextflowbioinformaticspipelinesdockerreproducibilityHPC

Nextflow DSL2: Building Modular, Scalable Bioinformatics Pipelines

A deep dive into Nextflow DSL2 — how to design modular, reusable pipeline components that scale from a laptop to an HPC cluster or the cloud.

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July 11, 2022
dockersingularitycontainersbioinformaticsreproducibilityCI/CDHPC

Containerising Bioinformatics Tools: Docker and Singularity Best Practices

A practical guide to building minimal, reproducible Docker images for bioinformatics tools — and converting them to Singularity for HPC use — with real Dockerfiles and CI/CD integration.

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